STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mbd2methyl-CpG-binding domain protein 2. (412 aa)    
Predicted Functional Partners:
Gatad2a
LOW QUALITY PROTEIN: transcriptional repressor p66-alpha.
   
 0.951
Mta2
Metastasis-associated protein MTA2.
   
 0.948
Mta1
Metastasis-associated protein MTA1 isoform X2.
   
 0.923
Mta3
Metastasis-associated protein MTA3.
   
 0.917
Gatad2b
Transcriptional repressor p66-beta isoform X1.
    
 0.878
Rbbp7
Histone-binding protein RBBP7.
    
 0.848
Chd3
chromodomain-helicase-DNA-binding protein 3 isoform X8.
    
 0.836
LOC106023215
chromodomain-helicase-DNA-binding protein 4-like.
    
 0.834
Chd5
Chromodomain helicase DNA binding protein 5.
    
 0.834
LOC106020784
chromodomain-helicase-DNA-binding protein 4.
    
 0.834
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.