STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rpl1860S ribosomal protein L18. (188 aa)    
Predicted Functional Partners:
Fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
Rps16
40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
  
 0.989
ENSMAUP00000006329
annotation not available
  
 0.986
ENSMAUP00000007148
annotation not available
   
 0.982
Rps9
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
  
 
 0.981
ENSMAUP00000006787
annotation not available
  
 0.979
Rps28
40S ribosomal protein S28.
  
 
 0.977
Rpl22
60S ribosomal protein L22.
   
 0.973
Rps5
40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
   
 
 0.973
Rpl4
60S ribosomal protein L4.
  
 0.973
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.