STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nphp1Nephrocystin-1 isoform X1. (685 aa)    
Predicted Functional Partners:
Nphp4
Nephrocystin-4 isoform X2.
   
 0.990
Itsn2
Intersectin-2.
     
 0.979
Rpgrip1l
Protein fantom isoform X2.
    
 0.961
Mysm1
Histone H2A deubiquitinase MYSM1 isoform X1.
    
 0.900
Invs
Inversin isoform X2.
    
 0.828
Rpgr
X-linked retinitis pigmentosa GTPase regulator isoform X3.
    
 
 0.809
Rpgrip1
X-linked retinitis pigmentosa GTPase regulator-interacting protein 1.
    
 0.805
Septin2
Septin-2; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
    
 0.785
Dctn2
Dynactin subunit 2 isoform X3.
    
 0.776
Arpc4
Actin-related protein 2/3 complex subunit 4.
   
 0.773
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.