STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pkd1Polycystin-1 isoform X3. (4294 aa)    
Predicted Functional Partners:
Pkd2
Polycystin-2.
    
0.997
Pkd2l1
LOW QUALITY PROTEIN: polycystic kidney disease 2-like 1 protein.
    
0.956
Pkd2l2
Polycystic kidney disease 2-like 2 protein.
    
0.863
Myot
Myotilin isoform X2.
    
 0.846
Rho
Rhodopsin.
     
 0.682
Nphp1
Nephrocystin-1 isoform X1.
   
 
 0.674
Exoc5
Exocyst complex component 5.
     
 0.670
Pkd1l3
Polycystic kidney disease protein 1-like 3.
    
0.640
Pkd1l2
Polycystic kidney disease protein 1-like 2.
    
0.639
1700022I11Rik
Uncharacterized protein C9orf131 homolog.
    
 
 0.639
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.