STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ltbp3Latent-transforming growth factor beta-binding protein 3 isoform X2. (1253 aa)    
Predicted Functional Partners:
Tgfb1
Transforming growth factor beta-1.
   
 0.929
Tgfb2
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.870
Tgfb3
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.828
Itgb6
Integrin beta; Belongs to the integrin beta chain family.
    
 0.801
Rbpj
Recombining binding protein suppressor of hairless isoform X1.
    
 0.748
Col17a1
120 kDa linear IgA disease antigen homolog; May play a role in the integrity of hemidesmosome and the attachment of basal keratinocytes to the underlying basement membrane.
    
 0.693
Ptk7
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.662
Itgb1
Integrin beta; Belongs to the integrin beta chain family.
    
  0.656
Itgb3
Integrin beta; Belongs to the integrin beta chain family.
    
  0.656
Thbs1
Thrombospondin-1 isoform X1.
     
 0.651
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.