STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Usp43Ubiquitin carboxyl-terminal hydrolase 43; Belongs to the peptidase C19 family. (971 aa)    
Predicted Functional Partners:
Usp10
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
    
 0.737
Pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.718
Isg15
Ubiquitin-like protein ISG15.
    
 0.715
Traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.701
Rps27a
ubiquitin-40S ribosomal protein S27a.
    
 0.683
ENSMAUP00000019431
annotation not available
    
 0.683
Rnf123
E3 ubiquitin-protein ligase RNF123 isoform X4.
   
 0.673
Mysm1
Histone H2A deubiquitinase MYSM1 isoform X1.
   
 
 0.649
ENSMAUP00000006950
annotation not available
    
 0.648
Rfc4
Replication factor C subunit 4.
    
  0.644
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.