STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sall4Sal-like protein 4 isoform X1. (1061 aa)    
Predicted Functional Partners:
Pou5f1
POU domain protein.
   
 0.945
Pou5f2
POU domain protein.
   
 0.905
Sox2
Transcription factor SOX-2.
    
 0.853
Crbn
Protein cereblon isoform X2.
    
 
 0.780
Rbbp7
Histone-binding protein RBBP7.
    
 0.777
ENSMAUP00000005944
annotation not available
    
 0.775
ENSMAUP00000007717
annotation not available
    
 0.775
ENSMAUP00000012323
annotation not available
    
 0.775
Rbbp4
RB binding protein 4, chromatin remodeling factor.
    
 0.775
ENSMAUP00000019419
annotation not available
    
 0.775
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.