STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vac14Protein VAC14 homolog. (756 aa)    
Predicted Functional Partners:
Pikfyve
1-phosphatidylinositol 3-phosphate 5-kinase isoform X3.
    
 0.996
Fig4
Polyphosphoinositide phosphatase.
    
 0.996
Dipk2a
Deleted in autism protein 1.
    
 0.980
Wipi1
WD repeat domain phosphoinositide-interacting protein 1.
    
 
 0.788
Wipi2
WD repeat domain phosphoinositide-interacting protein 2.
    
 
 0.756
Rad54l
DNA repair and recombination protein RAD54-like.
 
  
   0.608
Yars
Tyrosine--tRNA ligase.
      
 0.607
Stk40
Serine/threonine-protein kinase 40 isoform X1.
    
 
 0.605
Soat1
O-acyltransferase.
      
 0.601
Usp33
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
      
 0.598
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.