STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccnt1cyclin-T1; Belongs to the cyclin family. (727 aa)    
Predicted Functional Partners:
Cdk9
Cyclin-dependent kinase 9; Belongs to the protein kinase superfamily.
   
 0.999
Aff4
AF4/FMR2 family member 4.
   
 0.997
Ccnt2
cyclin-T2 isoform X1; Belongs to the cyclin family.
    
0.945
Brd4
Bromodomain-containing protein 4 isoform X1.
    
 
 0.941
Aff1
AF4/FMR2 family member 1 isoform X2.
   
 0.938
Ell
RNA polymerase II elongation factor ELL.
    
 0.933
Larp7
La-related protein 7.
   
 0.931
Ell2
RNA polymerase II elongation factor ELL2.
    
 0.929
Mllt3
Protein AF-9 isoform X1.
    
 0.922
Ell3
RNA polymerase II elongation factor ELL3 isoform X1.
    
 0.919
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.