STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ca8Carbonic anhydrase-related protein isoform X2; Belongs to the alpha-carbonic anhydrase family. (291 aa)    
Predicted Functional Partners:
Itpr1
Inositol 1,4,5-trisphosphate receptor type 1 isoform X2.
   
 
 0.771
Rpf2
Ribosome production factor 2 homolog.
   
 
 0.716
Rrs1
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
 
 0.636
Wdr43
WD repeat-containing protein 43.
   
    0.569
Grwd1
Glutamate-rich WD repeat-containing protein 1.
   
  
 0.568
Gtpbp4
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
  
 0.556
Nsun6
Putative methyltransferase NSUN6 isoform X1; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
   0.549
Noc2l
Nucleolar complex protein 2 homolog.
   
    0.547
Wdr36
WD repeat-containing protein 36 isoform X2.
   
    0.547
Pwp2
PWP2 periodic tryptophan protein homolog (yeast).
   
    0.547
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.