STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sart1U4/U6.U5 tri-snRNP-associated protein 1 isoform X1. (806 aa)    
Predicted Functional Partners:
Prpf31
U4/U6 small nuclear ribonucleoprotein Prp31.
   
 0.999
Prpf6
pre-mRNA-processing factor 6.
   
 0.999
Snu13
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
    
 0.998
Snrnp200
U5 small nuclear ribonucleoprotein 200 kDa helicase.
   
 0.998
Prpf8
pre-mRNA-processing-splicing factor 8.
   
 0.998
Zmat2
Zinc finger matrin-type 2.
    
 0.998
Prpf3
U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1.
    
 0.998
Prpf4
U4/U6 small nuclear ribonucleoprotein Prp4.
    
 0.998
Eftud2
116 kDa U5 small nuclear ribonucleoprotein component isoform X1.
    
 0.998
Mfap1
Microfibrillar-associated protein 1.
   
 0.998
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.