Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSMAUP00000006950 | Mad2l2 | ENSMAUP00000006950 | ENSMAUP00000022750 | annotation not available | Mitotic spindle assembly checkpoint protein MAD2B. | 0.863 |
ENSMAUP00000006950 | Pcna | ENSMAUP00000006950 | ENSMAUP00000009744 | annotation not available | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.999 |
ENSMAUP00000006950 | Pold1 | ENSMAUP00000006950 | ENSMAUP00000003562 | annotation not available | DNA polymerase delta catalytic subunit; As the catalytic component of the trimeric (Pol-delta3 complex) and tetrameric DNA polymerase delta complexes (Pol-delta4 complex), plays a crucial role in high fidelity genome replication, including in lagging strand synthesis, and repair. Exhibits both DNA polymerase and 3'- to 5'-exonuclease activities. Requires the presence of accessory proteins POLD2, POLD3 and POLD4 for full activity. Depending upon the absence (Pol-delta3) or the presence of POLD4 (Pol- delta4), displays differences in catalytic activity. Most notably, expresses higher pro [...] | 0.915 |
ENSMAUP00000006950 | Polk | ENSMAUP00000006950 | ENSMAUP00000017800 | annotation not available | DNA polymerase kappa. | 0.872 |
ENSMAUP00000006950 | Rad51 | ENSMAUP00000006950 | ENSMAUP00000022024 | annotation not available | DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] | 0.939 |
ENSMAUP00000006950 | Rev1 | ENSMAUP00000006950 | ENSMAUP00000022551 | annotation not available | DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. | 0.898 |
ENSMAUP00000006950 | Rev3l | ENSMAUP00000006950 | ENSMAUP00000019760 | annotation not available | DNA polymerase zeta catalytic subunit. | 0.930 |
ENSMAUP00000006950 | Rfc4 | ENSMAUP00000006950 | ENSMAUP00000003877 | annotation not available | Replication factor C subunit 4. | 0.999 |
ENSMAUP00000006950 | Tp53 | ENSMAUP00000006950 | ENSMAUP00000025852 | annotation not available | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression. Its pro-apoptotic activity is activated via its intera [...] | 0.521 |
ENSMAUP00000006950 | Wrn | ENSMAUP00000006950 | ENSMAUP00000017330 | annotation not available | Werner syndrome ATP-dependent helicase isoform X1. | 0.990 |
Mad2l2 | ENSMAUP00000006950 | ENSMAUP00000022750 | ENSMAUP00000006950 | Mitotic spindle assembly checkpoint protein MAD2B. | annotation not available | 0.863 |
Mad2l2 | Pcna | ENSMAUP00000022750 | ENSMAUP00000009744 | Mitotic spindle assembly checkpoint protein MAD2B. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.938 |
Mad2l2 | Pold1 | ENSMAUP00000022750 | ENSMAUP00000003562 | Mitotic spindle assembly checkpoint protein MAD2B. | DNA polymerase delta catalytic subunit; As the catalytic component of the trimeric (Pol-delta3 complex) and tetrameric DNA polymerase delta complexes (Pol-delta4 complex), plays a crucial role in high fidelity genome replication, including in lagging strand synthesis, and repair. Exhibits both DNA polymerase and 3'- to 5'-exonuclease activities. Requires the presence of accessory proteins POLD2, POLD3 and POLD4 for full activity. Depending upon the absence (Pol-delta3) or the presence of POLD4 (Pol- delta4), displays differences in catalytic activity. Most notably, expresses higher pro [...] | 0.972 |
Mad2l2 | Polk | ENSMAUP00000022750 | ENSMAUP00000017800 | Mitotic spindle assembly checkpoint protein MAD2B. | DNA polymerase kappa. | 0.969 |
Mad2l2 | Rad51 | ENSMAUP00000022750 | ENSMAUP00000022024 | Mitotic spindle assembly checkpoint protein MAD2B. | DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] | 0.825 |
Mad2l2 | Rev1 | ENSMAUP00000022750 | ENSMAUP00000022551 | Mitotic spindle assembly checkpoint protein MAD2B. | DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. | 0.999 |
Mad2l2 | Rev3l | ENSMAUP00000022750 | ENSMAUP00000019760 | Mitotic spindle assembly checkpoint protein MAD2B. | DNA polymerase zeta catalytic subunit. | 0.999 |
Mad2l2 | Rfc4 | ENSMAUP00000022750 | ENSMAUP00000003877 | Mitotic spindle assembly checkpoint protein MAD2B. | Replication factor C subunit 4. | 0.863 |
Mad2l2 | Wrn | ENSMAUP00000022750 | ENSMAUP00000017330 | Mitotic spindle assembly checkpoint protein MAD2B. | Werner syndrome ATP-dependent helicase isoform X1. | 0.499 |
Pcna | ENSMAUP00000006950 | ENSMAUP00000009744 | ENSMAUP00000006950 | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | annotation not available | 0.999 |
page 1 of 6