STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ush1gUsher syndrome type-1G protein. (461 aa)    
Predicted Functional Partners:
Ush1c
USH1 protein network component harmonin.
    
 0.997
Myo7a
Unconventional myosin-VIIa isoform X2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.985
Myo7b
Unconventional myosin-VIIb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.954
Myo15
Unconventional myosin-XV; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.863
Pdzd7
PDZ domain-containing protein 7.
    
 0.857
Myo15b
Myosin XVB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.831
ENSMAUP00000015453
annotation not available
   
 0.819
Whrn
Whirlin.
    
 0.818
Cdh23
Cadherin-23.
   
 0.811
Pcdh15
Protocadherin-15 isoform X4.
    
 0.809
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.