STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbc1d13TBC1 domain family member 13. (331 aa)    
Predicted Functional Partners:
Rab35
Ras-related protein Rab-35 isoform X1.
     
 0.876
Nckipsd
NCK-interacting protein with SH3 domain.
   
    0.727
Ift27
Intraflagellar transport protein 27 homolog isoform X1.
     
 0.714
Tbc1d21
TBC1 domain family member 21.
   
  
 0.609
Tbc1d10c
Carabin isoform X1.
      
 0.594
Evi5
Ecotropic viral integration site 5 protein homolog.
     
 0.587
Spout1
Putative methyltransferase C9orf114 homolog.
      
 0.580
Tbc1d8
TBC1 domain family, member 8.
     
 0.576
Tbc1d19
TBC1 domain family member 19 isoform X1.
      
 0.572
Atp6v0c
TBC1 domain family member 24 isoform X1.
      
 0.567
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.