STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ubxn7UBX domain-containing protein 7. (467 aa)    
Predicted Functional Partners:
Vcp
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
   
 0.999
Cul2
Cullin-2; Belongs to the cullin family.
    
 0.999
Spata5l1
Spermatogenesis-associated protein 5-like protein 1 isoform X1.
   
 0.999
Ufd1
Ubiquitin recognition factor in ER-associated degradation protein 1 isoform X1.
    
 0.999
Spata5
Spermatogenesis-associated protein 5 isoform X1.
   
 0.999
Faap100
Fanconi anemia core complex-associated protein 100.
    
 0.999
Katnal2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 0.999
Psmb2
Proteasome subunit beta.
    
  0.999
Nploc4
Nuclear protein localization protein 4 homolog isoform X1.
    
 0.999
Cul1
Cullin-1; Belongs to the cullin family.
   
 0.997
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.