STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Raver1Ribonucleoprotein PTB-binding 1. (744 aa)    
Predicted Functional Partners:
Vcl
Vinculin isoform X1.
    
 
 0.977
Fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
   0.840
Hnrnpl
Heterogeneous nuclear ribonucleoprotein L isoform X2.
   
 0.806
Cherp
Calcium homeostasis endoplasmic reticulum protein isoform X1.
   
    0.793
Hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.731
Ptbp2
Polypyrimidine tract-binding protein 2 isoform X3.
   
 0.716
LOC101823625
NADPH-dependent diflavin oxidoreductase 1; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Transfers electrons from NADPH to the Fe/S cluster of CIAPIN1. In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
   
    0.707
Hnrnpll
Heterogeneous nuclear ribonucleoprotein L-like.
   
 0.706
Cnot7
CCR4-NOT transcription complex subunit 7 isoform X1.
    
 
 0.670
Srsf2
Serine/arginine-rich splicing factor 2.
     
 0.664
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.