STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc27a6Long-chain fatty acid transport protein 6. (619 aa)    
Predicted Functional Partners:
Bbs1
Bardet-Biedl syndrome 1 protein.
   
 0.924
Bbs7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
    
 0.922
Bbs9
Protein PTHB1 isoform X1.
   
 0.919
Ttc8
Tetratricopeptide repeat protein 8.
    
 0.899
Scp2
Non-specific lipid-transfer protein isoform X2; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.881
ENSMAUP00000023469
annotation not available
   
 
 0.881
Bbs4
Bardet-Biedl syndrome 4 protein.
    
 0.880
Slc27a5
Bile acyl-CoA synthetase.
  
  
 
0.844
Slc27a4
Long-chain fatty acid transport protein 4.
  
  
 
0.807
Slc27a2
Very long-chain acyl-CoA synthetase.
  
  
 
0.795
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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