STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Prrt3Proline-rich transmembrane protein 3. (971 aa)    
Predicted Functional Partners:
Rps27a
ubiquitin-40S ribosomal protein S27a.
    
 0.834
ENSMAUP00000019431
annotation not available
    
 0.834
Nedd8
NEDD8.
   
 0.815
Uba3
Ubiquitin like modifier activating enzyme 3.
   
 0.784
Zfand4
AN1-type zinc finger protein 4 isoform X2.
    
 0.758
ENSMAUP00000002256
annotation not available
    
  0.756
Kxd1
ubiquitin-60S ribosomal protein L40.
    
  0.756
LOC101823019
Ubiquitin-like.
    
  0.756
ENSMAUP00000007258
annotation not available
    
  0.756
Ubb
polyubiquitin-B.
    
  0.756
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.