STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BsndBarttin. (311 aa)    
Predicted Functional Partners:
Clcnkb
Chloride channel protein.
   
 
 0.861
Clcnka
Chloride channel protein.
   
 
 0.857
Usp24
Ubiquitin carboxyl-terminal hydrolase 24; Belongs to the peptidase C19 family.
      
 0.837
Ldlr
Low-density lipoprotein receptor isoform X1.
     
 0.723
Clcn5
Chloride channel protein.
     
 0.711
Clcn1
Chloride channel protein.
   
 
 0.703
Clcn2
Chloride channel protein.
   
 
 0.680
Pcsk9
Proprotein convertase subtilisin/kexin type 9; Belongs to the peptidase S8 family.
      
 0.666
Egf
Pro-epidermal growth factor; EGF stimulates the growth of various epidermal and epithelial tissues in vivo and in vitro and of some fibroblasts in cell culture. Magnesiotropic hormone that stimulates magnesium reabsorption in the renal distal convoluted tubule via engagement of EGFR and activation of the magnesium channel TRPM6.
     
 0.648
Slc12a1
Solute carrier family 12 member 1.
   
  
 0.638
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.