Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ncoa5 | Nup107 | ENSMAUP00000025140 | ENSMAUP00000025642 | Nuclear receptor coactivator 5 isoform X1. | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | 0.973 |
Ncoa5 | Nup155 | ENSMAUP00000025140 | ENSMAUP00000003217 | Nuclear receptor coactivator 5 isoform X1. | Nucleoporin 155. | 0.974 |
Ncoa5 | Nup205 | ENSMAUP00000025140 | ENSMAUP00000024389 | Nuclear receptor coactivator 5 isoform X1. | Nuclear pore complex protein Nup205 isoform X6. | 0.975 |
Ncoa5 | Nup214 | ENSMAUP00000025140 | ENSMAUP00000013336 | Nuclear receptor coactivator 5 isoform X1. | Nuclear pore complex protein Nup214 isoform X2. | 0.975 |
Ncoa5 | Nup54 | ENSMAUP00000025140 | ENSMAUP00000009959 | Nuclear receptor coactivator 5 isoform X1. | Nucleoporin p54 isoform X3. | 0.976 |
Ncoa5 | Nup93 | ENSMAUP00000025140 | ENSMAUP00000016265 | Nuclear receptor coactivator 5 isoform X1. | Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. | 0.976 |
Ncoa5 | Rae1 | ENSMAUP00000025140 | ENSMAUP00000016407 | Nuclear receptor coactivator 5 isoform X1. | mRNA export factor. | 0.975 |
Ncoa5 | Ranbp2 | ENSMAUP00000025140 | ENSMAUP00000013377 | Nuclear receptor coactivator 5 isoform X1. | E3 SUMO-protein ligase RanBP2. | 0.999 |
Ncoa5 | Sec13 | ENSMAUP00000025140 | ENSMAUP00000012807 | Nuclear receptor coactivator 5 isoform X1. | Protein SEC13 homolog; Belongs to the WD repeat SEC13 family. | 0.976 |
Ncoa5 | Seh1l | ENSMAUP00000025140 | ENSMAUP00000016874 | Nuclear receptor coactivator 5 isoform X1. | SEH1 like nucleoporin. | 0.973 |
Nup107 | Ncoa5 | ENSMAUP00000025642 | ENSMAUP00000025140 | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | Nuclear receptor coactivator 5 isoform X1. | 0.973 |
Nup107 | Nup155 | ENSMAUP00000025642 | ENSMAUP00000003217 | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | Nucleoporin 155. | 0.999 |
Nup107 | Nup205 | ENSMAUP00000025642 | ENSMAUP00000024389 | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | Nuclear pore complex protein Nup205 isoform X6. | 0.999 |
Nup107 | Nup214 | ENSMAUP00000025642 | ENSMAUP00000013336 | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | Nuclear pore complex protein Nup214 isoform X2. | 0.998 |
Nup107 | Nup54 | ENSMAUP00000025642 | ENSMAUP00000009959 | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | Nucleoporin p54 isoform X3. | 0.998 |
Nup107 | Nup93 | ENSMAUP00000025642 | ENSMAUP00000016265 | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. | 0.999 |
Nup107 | Rae1 | ENSMAUP00000025642 | ENSMAUP00000016407 | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | mRNA export factor. | 0.963 |
Nup107 | Ranbp2 | ENSMAUP00000025642 | ENSMAUP00000013377 | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | E3 SUMO-protein ligase RanBP2. | 0.999 |
Nup107 | Sec13 | ENSMAUP00000025642 | ENSMAUP00000012807 | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | Protein SEC13 homolog; Belongs to the WD repeat SEC13 family. | 0.999 |
Nup107 | Seh1l | ENSMAUP00000025642 | ENSMAUP00000016874 | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | SEH1 like nucleoporin. | 0.999 |
page 1 of 6