STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMAUP00000025354annotation not available (278 aa)    
Predicted Functional Partners:
Ifi47
T-cell-specific guanine nucleotide triphosphate-binding protein 1-like.
  
 
 
0.753
Pla2g4a
Phospholipase A2.
    
 0.702
Prkn
RBR-type E3 ubiquitin transferase.
    
  0.684
Ube2l3
Ubiquitin-conjugating enzyme E2 L3 isoform X1; Belongs to the ubiquitin-conjugating enzyme family.
   
 
  0.643
Cask
Peripheral plasma membrane protein CASK isoform X4; Belongs to the MAGUK family.
   
 0.616
Rps27a
ubiquitin-40S ribosomal protein S27a.
    
  0.587
ENSMAUP00000019431
annotation not available
    
  0.587
Ripk4
Receptor-interacting serine/threonine-protein kinase 4.
    
 0.581
Cfap70
Cilia- and flagella-associated protein 70.
   
 0.579
Rhot1
Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.
   
 0.579
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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