STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW12557.1Hypothetical protein. (208 aa)    
Predicted Functional Partners:
SFW12545.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
 
     0.724
SFW66168.1
Right handed beta helix region.
  
     0.692
SFW18991.1
Ricin-type beta-trefoil lectin domain-like; Belongs to the glycosyl hydrolase 43 family.
  
     0.679
SFW57749.1
Rhamnogalacturonan endolyase.
  
  
  0.646
SFW79161.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
     0.622
SFW33835.1
Lysophospholipase L1.
  
     0.568
SFW85328.1
Beta-1,3-glucanase.
  
  
  0.551
SFW65172.1
NmrA-like family protein.
  
     0.528
SFW74074.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
     0.524
SFW15391.1
Virulence plasmid A protein.
  
     0.500
Your Current Organism:
Chitinophaga sancti
NCBI taxonomy Id: 1004
Other names: ATCC 23092, C. sancti, DSM 784, Flexibacter sancti, Flexibacter santosii, IFO 15057, LMG 8377, LMG:8377, NBRC 15057
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.