Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFW15213.1 | SFW18683.1 | SAMN05661012_00274 | SAMN05661012_00484 | AraC-type DNA-binding protein. | AraC-like ligand binding domain-containing protein. | 0.649 |
SFW15213.1 | SFW47417.1 | SAMN05661012_00274 | SAMN05661012_02012 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.658 |
SFW15213.1 | SFW63168.1 | SAMN05661012_00274 | SAMN05661012_03050 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.742 |
SFW15213.1 | SFW67853.1 | SAMN05661012_00274 | SAMN05661012_03489 | AraC-type DNA-binding protein. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.702 |
SFW15213.1 | SFW69392.1 | SAMN05661012_00274 | SAMN05661012_03583 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.739 |
SFW15213.1 | SFW81878.1 | SAMN05661012_00274 | SAMN05661012_05157 | AraC-type DNA-binding protein. | Helix-turn-helix domain-containing protein. | 0.677 |
SFW15213.1 | SFW84741.1 | SAMN05661012_00274 | SAMN05661012_05589 | AraC-type DNA-binding protein. | AraC-like ligand binding domain-containing protein. | 0.676 |
SFW15213.1 | SFW85184.1 | SAMN05661012_00274 | SAMN05661012_05672 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.652 |
SFW15213.1 | SFW88121.1 | SAMN05661012_00274 | SAMN05661012_06196 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.693 |
SFW15213.1 | SFW89512.1 | SAMN05661012_00274 | SAMN05661012_06447 | AraC-type DNA-binding protein. | Helix-turn-helix domain-containing protein. | 0.676 |
SFW18683.1 | SFW15213.1 | SAMN05661012_00484 | SAMN05661012_00274 | AraC-like ligand binding domain-containing protein. | AraC-type DNA-binding protein. | 0.649 |
SFW18683.1 | SFW69392.1 | SAMN05661012_00484 | SAMN05661012_03583 | AraC-like ligand binding domain-containing protein. | AraC-type DNA-binding protein. | 0.637 |
SFW18683.1 | SFW85184.1 | SAMN05661012_00484 | SAMN05661012_05672 | AraC-like ligand binding domain-containing protein. | AraC-type DNA-binding protein. | 0.583 |
SFW18683.1 | SFW89512.1 | SAMN05661012_00484 | SAMN05661012_06447 | AraC-like ligand binding domain-containing protein. | Helix-turn-helix domain-containing protein. | 0.721 |
SFW47417.1 | SFW15213.1 | SAMN05661012_02012 | SAMN05661012_00274 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.658 |
SFW47417.1 | SFW63168.1 | SAMN05661012_02012 | SAMN05661012_03050 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.446 |
SFW47417.1 | SFW67853.1 | SAMN05661012_02012 | SAMN05661012_03489 | AraC-type DNA-binding protein. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.697 |
SFW47417.1 | SFW69392.1 | SAMN05661012_02012 | SAMN05661012_03583 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.644 |
SFW47417.1 | SFW81878.1 | SAMN05661012_02012 | SAMN05661012_05157 | AraC-type DNA-binding protein. | Helix-turn-helix domain-containing protein. | 0.498 |
SFW47417.1 | SFW85184.1 | SAMN05661012_02012 | SAMN05661012_05672 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.641 |
page 1 of 3