STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW17807.1TonB-linked outer membrane protein, SusC/RagA family. (1036 aa)    
Predicted Functional Partners:
SFW17823.1
Starch-binding associating with outer membrane.
     0.947
SFW70072.1
Susd and RagB outer membrane lipoprotein.
  
     0.769
SFW39089.1
Starch-binding associating with outer membrane.
  
     0.768
SFW57624.1
Starch-binding associating with outer membrane.
 
     0.762
SFW51575.1
Starch-binding associating with outer membrane.
 
     0.759
SFW37766.1
Starch-binding associating with outer membrane.
  
     0.737
SFW62686.1
Starch-binding associating with outer membrane.
 
     0.735
SFW55199.1
Starch-binding associating with outer membrane.
 
     0.732
SFW39058.1
SusD family protein.
  
     0.720
SFW74007.1
Starch-binding associating with outer membrane.
 
     0.714
Your Current Organism:
Chitinophaga sancti
NCBI taxonomy Id: 1004
Other names: ATCC 23092, C. sancti, DSM 784, Flexibacter sancti, Flexibacter santosii, IFO 15057, LMG 8377, LMG:8377, NBRC 15057
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