Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFW24004.1 | SFW24018.1 | SAMN05661012_00682 | SAMN05661012_00683 | Radical SAM superfamily protein. | Hypothetical protein. | 0.773 |
SFW24004.1 | SFW24029.1 | SAMN05661012_00682 | SAMN05661012_00684 | Radical SAM superfamily protein. | Agmatinase; Belongs to the arginase family. | 0.825 |
SFW24004.1 | SFW24041.1 | SAMN05661012_00682 | SAMN05661012_00685 | Radical SAM superfamily protein. | Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. | 0.419 |
SFW24018.1 | SFW24004.1 | SAMN05661012_00683 | SAMN05661012_00682 | Hypothetical protein. | Radical SAM superfamily protein. | 0.773 |
SFW24018.1 | SFW24029.1 | SAMN05661012_00683 | SAMN05661012_00684 | Hypothetical protein. | Agmatinase; Belongs to the arginase family. | 0.787 |
SFW24018.1 | SFW24041.1 | SAMN05661012_00683 | SAMN05661012_00685 | Hypothetical protein. | Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. | 0.427 |
SFW24029.1 | SFW24004.1 | SAMN05661012_00684 | SAMN05661012_00682 | Agmatinase; Belongs to the arginase family. | Radical SAM superfamily protein. | 0.825 |
SFW24029.1 | SFW24018.1 | SAMN05661012_00684 | SAMN05661012_00683 | Agmatinase; Belongs to the arginase family. | Hypothetical protein. | 0.787 |
SFW24029.1 | SFW24041.1 | SAMN05661012_00684 | SAMN05661012_00685 | Agmatinase; Belongs to the arginase family. | Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. | 0.445 |
SFW24041.1 | SFW24004.1 | SAMN05661012_00685 | SAMN05661012_00682 | Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. | Radical SAM superfamily protein. | 0.419 |
SFW24041.1 | SFW24018.1 | SAMN05661012_00685 | SAMN05661012_00683 | Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. | Hypothetical protein. | 0.427 |
SFW24041.1 | SFW24029.1 | SAMN05661012_00685 | SAMN05661012_00684 | Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. | Agmatinase; Belongs to the arginase family. | 0.445 |