STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW25120.1Putative ABC transport system ATP-binding protein. (249 aa)    
Predicted Functional Partners:
SFW25132.1
Putative ABC transport system permease protein.
  0.993
SFW46225.1
Putative ABC transport system permease protein.
  0.980
SFW26221.1
ABC-type antimicrobial peptide transport system, permease component.
 
 0.976
SFW84505.1
ABC-type antimicrobial peptide transport system, permease component.
 
 0.975
SFW84502.1
FtsX-like permease family protein.
 
 0.973
SFW79395.1
ABC-type antimicrobial peptide transport system, permease component.
 
 0.972
SFW34442.1
Putative ABC transport system permease protein.
 
 0.970
SFW25110.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.942
SFW76672.1
Putative ABC transport system permease protein.
  0.938
SFW45553.1
Putative ABC transport system permease protein.
  0.926
Your Current Organism:
Chitinophaga sancti
NCBI taxonomy Id: 1004
Other names: ATCC 23092, C. sancti, DSM 784, Flexibacter sancti, Flexibacter santosii, IFO 15057, LMG 8377, LMG:8377, NBRC 15057
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.