STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW34616.1Protein of unknown function. (358 aa)    
Predicted Functional Partners:
SFW34593.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.919
SFW34606.1
Starch-binding associating with outer membrane.
 
     0.917
SFW34580.1
Starch-binding associating with outer membrane.
 
     0.859
SFW34566.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.815
SFW80600.1
HEPN domain-containing protein.
  
     0.771
SFW83811.1
Chitinase.
  
  
 0.751
SFW13574.1
LicD family protein.
  
     0.746
SFW67809.1
Protein of unknown function.
  
     0.707
SFW79871.1
Hypothetical protein.
  
     0.696
SFW91160.1
ADP-ribosylglycohydrolase.
  
     0.669
Your Current Organism:
Chitinophaga sancti
NCBI taxonomy Id: 1004
Other names: ATCC 23092, C. sancti, DSM 784, Flexibacter sancti, Flexibacter santosii, IFO 15057, LMG 8377, LMG:8377, NBRC 15057
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.