STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW39370.1Gliding motility-associated lipoprotein GldK/gliding motility-associated lipoprotein GldK,TIGR03529. (431 aa)    
Predicted Functional Partners:
SFW39350.1
Gliding motility-associated protein GldM.
 
   
 0.866
SFW39362.1
Gliding motility-associated protein GldL.
 
   
 0.855
SFW39339.1
Gliding motility associated protien GldN.
 
   
 0.839
SFW46380.1
Outer membrane protein beta-barrel domain-containing protein.
 
   
 0.778
SFW71575.1
Gliding motility-associated lipoprotein GldD.
  
   
 0.758
SFW44984.1
Cell surface protein SprA.
  
   
 0.757
SFW82631.1
Hypothetical protein.
  
   
 0.757
SFW33796.1
Cell surface protein SprA.
  
   
 0.754
SFW57153.1
Protein of unknown function.
  
     0.743
SFW45219.1
Protein of unknown function.
  
     0.731
Your Current Organism:
Chitinophaga sancti
NCBI taxonomy Id: 1004
Other names: ATCC 23092, C. sancti, DSM 784, Flexibacter sancti, Flexibacter santosii, IFO 15057, LMG 8377, LMG:8377, NBRC 15057
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.