Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFW23369.1 | ybeY | SAMN05661012_00637 | SAMN05661012_01761 | Phosphate starvation-inducible protein PhoH. | rRNA maturation RNase YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.891 |
| SFW61458.1 | SFW71650.1 | SAMN05661012_02967 | SAMN05661012_03803 | Amino acid adenylation domain-containing protein. | Glyoxylase, beta-lactamase superfamily II. | 0.991 |
| SFW61458.1 | SFW87119.1 | SAMN05661012_02967 | SAMN05661012_06023 | Amino acid adenylation domain-containing protein. | Ketoacyl-synthetase C-terminal extension. | 0.999 |
| SFW61458.1 | rplK | SAMN05661012_02967 | SAMN05661012_02671 | Amino acid adenylation domain-containing protein. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.986 |
| SFW61458.1 | rplO | SAMN05661012_02967 | SAMN05661012_02601 | Amino acid adenylation domain-containing protein. | Large subunit ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.986 |
| SFW61458.1 | rplQ | SAMN05661012_02967 | SAMN05661012_02609 | Amino acid adenylation domain-containing protein. | Large subunit ribosomal protein L17. | 0.987 |
| SFW61458.1 | rplU | SAMN05661012_02967 | SAMN05661012_02127 | Amino acid adenylation domain-containing protein. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.993 |
| SFW61458.1 | rplX | SAMN05661012_02967 | SAMN05661012_02593 | Amino acid adenylation domain-containing protein. | Large subunit ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.985 |
| SFW61458.1 | rpsQ | SAMN05661012_02967 | SAMN05661012_02591 | Amino acid adenylation domain-containing protein. | Small subunit ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.972 |
| SFW61458.1 | ybeY | SAMN05661012_02967 | SAMN05661012_01761 | Amino acid adenylation domain-containing protein. | rRNA maturation RNase YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.984 |
| SFW71650.1 | SFW61458.1 | SAMN05661012_03803 | SAMN05661012_02967 | Glyoxylase, beta-lactamase superfamily II. | Amino acid adenylation domain-containing protein. | 0.991 |
| SFW71650.1 | SFW87119.1 | SAMN05661012_03803 | SAMN05661012_06023 | Glyoxylase, beta-lactamase superfamily II. | Ketoacyl-synthetase C-terminal extension. | 0.991 |
| SFW71650.1 | rplK | SAMN05661012_03803 | SAMN05661012_02671 | Glyoxylase, beta-lactamase superfamily II. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.728 |
| SFW71650.1 | rplO | SAMN05661012_03803 | SAMN05661012_02601 | Glyoxylase, beta-lactamase superfamily II. | Large subunit ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.628 |
| SFW71650.1 | rplQ | SAMN05661012_03803 | SAMN05661012_02609 | Glyoxylase, beta-lactamase superfamily II. | Large subunit ribosomal protein L17. | 0.789 |
| SFW71650.1 | rplU | SAMN05661012_03803 | SAMN05661012_02127 | Glyoxylase, beta-lactamase superfamily II. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.792 |
| SFW71650.1 | rplX | SAMN05661012_03803 | SAMN05661012_02593 | Glyoxylase, beta-lactamase superfamily II. | Large subunit ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.632 |
| SFW71650.1 | rpsQ | SAMN05661012_03803 | SAMN05661012_02591 | Glyoxylase, beta-lactamase superfamily II. | Small subunit ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.970 |
| SFW71650.1 | ybeY | SAMN05661012_03803 | SAMN05661012_01761 | Glyoxylase, beta-lactamase superfamily II. | rRNA maturation RNase YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.984 |
| SFW87119.1 | SFW61458.1 | SAMN05661012_06023 | SAMN05661012_02967 | Ketoacyl-synthetase C-terminal extension. | Amino acid adenylation domain-containing protein. | 0.999 |
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