Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFW37893.1 | SFW39854.1 | SAMN05661012_01422 | SAMN05661012_01560 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit. | 0.927 |
SFW37893.1 | SFW42545.1 | SAMN05661012_01422 | SAMN05661012_01774 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | MFS transporter, MHS family, alpha-ketoglutarate permease. | 0.610 |
SFW37893.1 | SFW42589.1 | SAMN05661012_01422 | SAMN05661012_01777 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | 0.689 |
SFW37893.1 | SFW63834.1 | SAMN05661012_01422 | SAMN05661012_03122 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.915 |
SFW39854.1 | SFW37893.1 | SAMN05661012_01560 | SAMN05661012_01422 | Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.927 |
SFW39854.1 | SFW42545.1 | SAMN05661012_01560 | SAMN05661012_01774 | Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit. | MFS transporter, MHS family, alpha-ketoglutarate permease. | 0.699 |
SFW39854.1 | SFW42589.1 | SAMN05661012_01560 | SAMN05661012_01777 | Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit. | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | 0.782 |
SFW39854.1 | SFW63834.1 | SAMN05661012_01560 | SAMN05661012_03122 | Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit. | Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.982 |
SFW42397.1 | SFW42410.1 | SAMN05661012_01768 | SAMN05661012_01769 | Hypothetical protein. | AAA domain (dynein-related subfamily). | 0.962 |
SFW42397.1 | SFW42422.1 | SAMN05661012_01768 | SAMN05661012_01770 | Hypothetical protein. | Hypothetical protein. | 0.937 |
SFW42397.1 | SFW42480.1 | SAMN05661012_01768 | SAMN05661012_01771 | Hypothetical protein. | SWIM zinc finger. | 0.930 |
SFW42397.1 | SFW42518.1 | SAMN05661012_01768 | SAMN05661012_01772 | Hypothetical protein. | Hypothetical protein. | 0.641 |
SFW42397.1 | SFW42533.1 | SAMN05661012_01768 | SAMN05661012_01773 | Hypothetical protein. | Protein of unknown function. | 0.597 |
SFW42397.1 | SFW42545.1 | SAMN05661012_01768 | SAMN05661012_01774 | Hypothetical protein. | MFS transporter, MHS family, alpha-ketoglutarate permease. | 0.589 |
SFW42410.1 | SFW42397.1 | SAMN05661012_01769 | SAMN05661012_01768 | AAA domain (dynein-related subfamily). | Hypothetical protein. | 0.962 |
SFW42410.1 | SFW42422.1 | SAMN05661012_01769 | SAMN05661012_01770 | AAA domain (dynein-related subfamily). | Hypothetical protein. | 0.937 |
SFW42410.1 | SFW42480.1 | SAMN05661012_01769 | SAMN05661012_01771 | AAA domain (dynein-related subfamily). | SWIM zinc finger. | 0.930 |
SFW42410.1 | SFW42518.1 | SAMN05661012_01769 | SAMN05661012_01772 | AAA domain (dynein-related subfamily). | Hypothetical protein. | 0.641 |
SFW42410.1 | SFW42533.1 | SAMN05661012_01769 | SAMN05661012_01773 | AAA domain (dynein-related subfamily). | Protein of unknown function. | 0.597 |
SFW42410.1 | SFW42545.1 | SAMN05661012_01769 | SAMN05661012_01774 | AAA domain (dynein-related subfamily). | MFS transporter, MHS family, alpha-ketoglutarate permease. | 0.589 |
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