STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW42576.1Protein-S-isoprenylcysteine O-methyltransferase Ste14. (184 aa)    
Predicted Functional Partners:
SFW33963.1
Hypothetical protein.
    
 0.866
SFW42589.1
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
    
  0.845
rpiA
Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
 
     0.689
SFW46275.1
Zn-dependent protease with chaperone function.
    
 0.609
rpsM
SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.
   
    0.523
SFW42603.1
Putative membrane protein.
       0.522
SFW86795.1
Hydroxyacylglutathione hydrolase.
    
  0.478
SFW60282.1
Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family.
     
 0.475
SFW42545.1
MFS transporter, MHS family, alpha-ketoglutarate permease.
       0.464
SFW42533.1
Protein of unknown function.
       0.459
Your Current Organism:
Chitinophaga sancti
NCBI taxonomy Id: 1004
Other names: ATCC 23092, C. sancti, DSM 784, Flexibacter sancti, Flexibacter santosii, IFO 15057, LMG 8377, LMG:8377, NBRC 15057
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.