STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW46454.1ATP-binding cassette, subfamily B. (585 aa)    
Predicted Functional Partners:
SFW87119.1
Ketoacyl-synthetase C-terminal extension.
  
 0.818
SFW61458.1
Amino acid adenylation domain-containing protein.
  
 0.749
SFW83989.1
ATP-binding cassette, subfamily B.
 
 
 
0.645
SFW82335.1
ATP-binding cassette, subfamily B.
 
 
 
0.644
SFW86281.1
ATP-binding cassette, subfamily B.
   
 
0.628
SFW90893.1
HxxPF-repeated domain-containing protein.
  
 
 0.523
SFW61384.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
  
 0.514
SFW61345.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein/natural product biosynthesis luciferase-like monooxygenase domain-containing protein.
  
 
 0.505
SFW81929.1
Phosphopantetheine attachment site.
  
 
 0.505
SFW12296.1
ATPase family associated with various cellular activities (AAA).
    
 0.502
Your Current Organism:
Chitinophaga sancti
NCBI taxonomy Id: 1004
Other names: ATCC 23092, C. sancti, DSM 784, Flexibacter sancti, Flexibacter santosii, IFO 15057, LMG 8377, LMG:8377, NBRC 15057
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