STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW47127.1Outer membrane receptor for ferrienterochelin and colicins. (686 aa)    
Predicted Functional Partners:
SFW47111.1
HmuY protein.
 
     0.866
SFW78135.1
Protein of unknown function.
  
     0.520
SFW63011.1
AhpC/TSA family protein.
  
     0.453
SFW64190.1
TonB-dependent receptor.
  
    0.448
SFW61384.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
  
 0.428
SFW47141.1
Hypothetical protein.
       0.423
SFW64178.1
Tetratricopeptide repeat-containing protein.
  
     0.415
SFW73370.1
AraC-type DNA-binding protein.
  
     0.410
SFW53084.1
TonB family C-terminal domain-containing protein.
  
   0.404
Your Current Organism:
Chitinophaga sancti
NCBI taxonomy Id: 1004
Other names: ATCC 23092, C. sancti, DSM 784, Flexibacter sancti, Flexibacter santosii, IFO 15057, LMG 8377, LMG:8377, NBRC 15057
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