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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW50727.1Hypothetical protein. (858 aa)    
Predicted Functional Partners:
SFW50737.1
N-acetylmuramoyl-L-alanine amidase.
       0.671
SFW50744.1
Hypothetical protein.
       0.671
SFW65114.1
Hemoglobin.
  
     0.623
SFW61458.1
Amino acid adenylation domain-containing protein.
 
  
 0.584
SFW87119.1
Ketoacyl-synthetase C-terminal extension.
 
  
 0.566
SFW26739.1
Hypothetical protein.
  
     0.554
SFW65106.1
Globin.
  
     0.519
SFW67181.1
Type IV secretory pathway, VirD4 component, TraG/TraD family ATPase.
    
   0.491
SFW87399.1
Type IV secretory system Conjugative DNA transfer.
    
   0.491
SFW26817.1
Starch-binding associating with outer membrane.
  
     0.466
Your Current Organism:
Chitinophaga sancti
NCBI taxonomy Id: 1004
Other names: ATCC 23092, C. sancti, DSM 784, Flexibacter sancti, Flexibacter santosii, IFO 15057, LMG 8377, LMG:8377, NBRC 15057
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.