STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW59567.1Peptidase family M28. (308 aa)    
Predicted Functional Partners:
SFW51608.1
Hypothetical protein.
  
 
 0.555
SFW56213.1
Beta-aspartyl-peptidase (threonine type).
  
    0.547
SFW39597.1
Dipeptidyl-peptidase-4.
  
     0.507
SFW32486.1
Hypothetical protein.
  
 
 0.489
SFW68787.1
Hypothetical protein.
  
 
 0.481
SFW89982.1
Dipeptidyl aminopeptidase/acylaminoacyl peptidase.
  
     0.456
SFW33963.1
Hypothetical protein.
    
  0.453
SFW66218.1
Hypothetical protein.
  
 
 0.445
SFW46775.1
Ferritin; Iron-storage protein.
    
  0.435
SFW84447.1
Glutathione synthetase, ATP-grasp domain.
  
  
  0.407
Your Current Organism:
Chitinophaga sancti
NCBI taxonomy Id: 1004
Other names: ATCC 23092, C. sancti, DSM 784, Flexibacter sancti, Flexibacter santosii, IFO 15057, LMG 8377, LMG:8377, NBRC 15057
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.