STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW61439.1Putative auto-transporter adhesin, head GIN domain. (186 aa)    
Predicted Functional Partners:
SFW61429.1
Outer membrane receptor proteins, mostly Fe transport.
       0.773
SFW61418.1
L-ascorbate metabolism protein UlaG, beta-lactamase superfamily.
       0.727
SFW61408.1
Glutamate decarboxylase.
       0.669
SFW61448.1
Putative ATP-binding cassette transporter.
       0.570
SFW61458.1
Amino acid adenylation domain-containing protein.
       0.543
SFW61468.1
Pimeloyl-ACP methyl ester carboxylesterase.
       0.521
SFW83332.1
OmpA family protein.
  
 
   0.512
SFW61478.1
Hypothetical protein.
       0.505
SFW61489.1
ADP-heptose:LPS heptosyltransferase.
       0.505
SFW15738.1
Flagellar protein FlgJ.
    
   0.487
Your Current Organism:
Chitinophaga sancti
NCBI taxonomy Id: 1004
Other names: ATCC 23092, C. sancti, DSM 784, Flexibacter sancti, Flexibacter santosii, IFO 15057, LMG 8377, LMG:8377, NBRC 15057
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.