STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW67877.1Protein of unknown function. (262 aa)    
Predicted Functional Partners:
SFW67884.1
Hypothetical protein.
 
     0.954
SFW67897.1
Transcriptional regulator, BadM/Rrf2 family.
 
     0.886
SFW67890.1
Metal-sulfur cluster biosynthetic enzyme.
 
     0.843
SFW67871.1
Hemerythrin HHE cation binding domain-containing protein.
 
     0.816
SFW67865.1
Uncharacterized protein, contains metal-binding DGC domain.
       0.784
SFW67903.1
Hypothetical protein.
       0.580
SFW84380.1
Protein of unknown function.
  
     0.536
SFW50850.1
Outer membrane protein TolC.
  
     0.516
SFW42118.1
Glutamate synthase (NADPH/NADH) large chain.
   
    0.511
SFW67859.1
Protein N-acetyltransferase, RimJ/RimL family.
       0.429
Your Current Organism:
Chitinophaga sancti
NCBI taxonomy Id: 1004
Other names: ATCC 23092, C. sancti, DSM 784, Flexibacter sancti, Flexibacter santosii, IFO 15057, LMG 8377, LMG:8377, NBRC 15057
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.