STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW72470.1TonB dependent receptor. (737 aa)    
Predicted Functional Partners:
SFW72465.1
Hypothetical protein.
 
     0.949
SFW72475.1
Response regulator receiver domain-containing protein.
 
     0.798
SFW80855.1
Hypothetical protein.
 
     0.785
SFW72481.1
Hypothetical protein.
       0.677
SFW78238.1
Protein of unknown function.
  
     0.589
SFW72460.1
Hypothetical protein.
       0.554
SFW81102.1
CysZ protein.
  
     0.449
SFW83450.1
Hypothetical protein.
  
     0.445
SFW61384.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
  
 0.428
SFW59633.1
Protein of unknown function.
  
     0.406
Your Current Organism:
Chitinophaga sancti
NCBI taxonomy Id: 1004
Other names: ATCC 23092, C. sancti, DSM 784, Flexibacter sancti, Flexibacter santosii, IFO 15057, LMG 8377, LMG:8377, NBRC 15057
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.