STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW76752.1Fe-S cluster assembly ATP-binding protein. (254 aa)    
Predicted Functional Partners:
SFW76746.1
Fe-S cluster assembly protein SufB.
 
 0.999
SFW76759.1
Iron-regulated ABC transporter permease protein SufD.
 
 
 0.996
SFW76766.1
Cysteine desulfurase / selenocysteine lyase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.970
SFW82671.1
Nitrogen fixation protein NifU.
  
  
 0.910
SFW76774.1
Cysteine desulfuration protein SufE.
 
 
 0.881
SFW76780.1
FeS assembly SUF system protein.
 
  
 0.848
SFW24806.1
Selenocysteine lyase/Cysteine desulfurase.
 
  
 0.831
SFW76741.1
Iron-sulfur cluster assembly protein; Belongs to the HesB/IscA family.
  
 
 0.829
SFW67890.1
Metal-sulfur cluster biosynthetic enzyme.
 
  
 0.750
SFW60813.1
ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
  
 0.471
Your Current Organism:
Chitinophaga sancti
NCBI taxonomy Id: 1004
Other names: ATCC 23092, C. sancti, DSM 784, Flexibacter sancti, Flexibacter santosii, IFO 15057, LMG 8377, LMG:8377, NBRC 15057
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.