STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW77032.1Glycosyl hydrolases family 2, sugar binding domain; Belongs to the glycosyl hydrolase 2 family. (899 aa)    
Predicted Functional Partners:
SFW33835.1
Lysophospholipase L1.
 
  0.867
SFW22473.1
DNA sulfur modification protein DndE; Belongs to the glycosyl hydrolase 28 family.
 0.822
SFW57749.1
Rhamnogalacturonan endolyase.
 
 0.804
SFW77037.1
Arylsulfatase A.
       0.783
SFW56219.1
Hypothetical protein.
 
  
  0.757
SFW33843.1
Farnesoic acid 0-methyl transferase.
 
 0.741
SFW56231.1
Rhamnogalacturonyl hydrolase YesR.
 
     0.738
SFW33858.1
Hypothetical protein.
 
 0.688
SFW28366.1
Protein of unknown function.
 
     0.638
SFW46829.1
Hypothetical protein.
 
    0.628
Your Current Organism:
Chitinophaga sancti
NCBI taxonomy Id: 1004
Other names: ATCC 23092, C. sancti, DSM 784, Flexibacter sancti, Flexibacter santosii, IFO 15057, LMG 8377, LMG:8377, NBRC 15057
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.