STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW79124.1Outer membrane protein beta-barrel domain-containing protein. (179 aa)    
Predicted Functional Partners:
SFW13003.1
Hypothetical protein.
  
     0.722
SFW88516.1
Hypothetical protein.
  
     0.701
SFW31840.1
Protein of unknown function.
  
     0.604
SFW72169.1
Periplasmic chaperone for outer membrane proteins Skp.
  
 
 
 0.560
SFW83785.1
SusD family protein.
  
    0.550
SFW31860.1
SusD family protein.
  
    0.536
SFW85696.1
Protein of unknown function.
  
     0.520
SFW79120.1
Putative intracellular protease/amidase.
       0.511
SFW79129.1
Histidine kinase.
       0.511
SFW83779.1
Protein of unknown function.
  
     0.507
Your Current Organism:
Chitinophaga sancti
NCBI taxonomy Id: 1004
Other names: ATCC 23092, C. sancti, DSM 784, Flexibacter sancti, Flexibacter santosii, IFO 15057, LMG 8377, LMG:8377, NBRC 15057
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