STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lolD-3Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. (233 aa)    
Predicted Functional Partners:
SFW79930.1
Lipoprotein-releasing system permease protein.
 
 0.987
SFW26221.1
ABC-type antimicrobial peptide transport system, permease component.
  
 0.965
SFW34442.1
Putative ABC transport system permease protein.
  
 0.965
SFW79395.1
ABC-type antimicrobial peptide transport system, permease component.
  
 0.965
SFW84502.1
FtsX-like permease family protein.
  
 0.965
SFW84505.1
ABC-type antimicrobial peptide transport system, permease component.
  
 0.965
SFW25132.1
Putative ABC transport system permease protein.
 
  0.951
SFW79269.1
Lipoprotein-releasing system permease protein.
 
 0.950
SFW79935.1
Biotin-lipoyl like.
 
 
 0.903
SFW46225.1
Putative ABC transport system permease protein.
 
  0.899
Your Current Organism:
Chitinophaga sancti
NCBI taxonomy Id: 1004
Other names: ATCC 23092, C. sancti, DSM 784, Flexibacter sancti, Flexibacter santosii, IFO 15057, LMG 8377, LMG:8377, NBRC 15057
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