STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW80223.1Oligo-1,6-glucosidase. (576 aa)    
Predicted Functional Partners:
SFW83890.1
4-alpha-glucanotransferase.
  
 
 0.830
SFW33063.1
Trehalose 6-phosphate synthase /trehalose 6-phosphatase.
  
 
 0.818
SFW80231.1
Maltooligosyl trehalose synthase.
 
 
 0.812
SFW80226.1
Maltooligosyl trehalose hydrolase.
 
 
0.779
SFW33755.1
Alpha-galactosidase.
 
 
 0.741
SFW52036.1
Beta-glucosidase.
 
 
 0.721
SFW85210.1
Alpha-glucan phosphorylases.
  
 0.703
SFW17692.1
Amino acid/polyamine/organocation transporter, APC superfamily.
    
 0.698
SFW17737.1
Ethanolamine permease.
    
 0.698
SFW56916.1
Basic amino acid/polyamine antiporter, APA family.
    
 0.698
Your Current Organism:
Chitinophaga sancti
NCBI taxonomy Id: 1004
Other names: ATCC 23092, C. sancti, DSM 784, Flexibacter sancti, Flexibacter santosii, IFO 15057, LMG 8377, LMG:8377, NBRC 15057
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.