STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW86860.1FecR family protein. (391 aa)    
Predicted Functional Partners:
SFW26182.1
FecR family protein.
  
     0.770
SFW47356.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
   0.768
SFW47258.1
FecR family protein.
  
     0.767
SFW62619.1
FecR family protein.
  
     0.766
SFW90444.1
FecR family protein.
  
     0.765
SFW80107.1
FecR family protein.
  
     0.755
SFW89812.1
FecR family protein.
  
     0.753
SFW79195.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
   0.718
SFW24917.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
   0.713
SFW86865.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
   0.705
Your Current Organism:
Chitinophaga sancti
NCBI taxonomy Id: 1004
Other names: ATCC 23092, C. sancti, DSM 784, Flexibacter sancti, Flexibacter santosii, IFO 15057, LMG 8377, LMG:8377, NBRC 15057
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.