STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001012815_01288Unannotated protein. (356 aa)    
Predicted Functional Partners:
GCA_001012815_01289
Unannotated protein.
  
 
 0.953
GCA_001012815_01287
Unannotated protein.
  
 
 0.880
GCA_001012815_01286
Unannotated protein.
  
 
 0.824
GCA_001012815_01291
Unannotated protein.
 
   0.783
GCA_001012815_04063
Unannotated protein.
  
 
  0.737
GCA_001012815_01290
Unannotated protein.
     
 0.685
GCA_001012815_03342
Unannotated protein.
  
     0.672
GCA_001012815_01285
Unannotated protein.
  
 
 0.660
GCA_001012815_03980
Unannotated protein.
  
     0.655
GCA_001012815_01953
Unannotated protein.
  
 
 0.652
Your Current Organism:
Vibrio mexicanus
NCBI taxonomy Id: 1004326
Other names: CECT 8828, DSM 100338, V. mexicanus, Vibrio mexicanus Gonzlez-Castillo et al. 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.