STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMUGP00000000057annotation not available (121 aa)    
Predicted Functional Partners:
Snrpa
U1 small nuclear ribonucleoprotein A.
   
 0.957
Snrpf
Small nuclear ribonucleoprotein F.
   
 0.926
Snrnp70
U1 small nuclear ribonucleoprotein 70 kDa.
   
 0.908
ENSMUGP00000026248
annotation not available
   
 0.908
Sf3b4
Splicing factor 3B subunit 4.
   
 0.899
Snrpd1
Small nuclear ribonucleoprotein Sm D1.
   
 0.896
Snrpn
Small nuclear ribonucleoprotein-associated protein N.
   
 0.878
Sf3b5
Splicing factor 3B subunit 5.
   
 0.872
Sf3b2
Splicing factor 3B subunit 2.
   
 0.871
Sf3b3
Splicing factor 3B subunit 3.
   
 0.868
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.