STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AppAmyloid beta A4 protein isoform X1. (770 aa)    
Predicted Functional Partners:
Apbb1
Amyloid beta A4 precursor protein-binding family B member 1 isoform X1.
    
 0.999
Tnfrsf21
Tumor necrosis factor receptor superfamily member 21.
    
 
 0.993
Apba2
Amyloid beta A4 precursor protein-binding family A member 2 isoform X1.
   
 
 0.992
Apbb2
Amyloid beta A4 precursor protein-binding family B member 2 isoform X1.
    
 0.991
Bace1
Beta-site APP-cleaving enzyme 1 (memapsin 2).
    
 0.984
Nae1
Amyloid beta precursor protein binding protein 1.
    
 0.980
Sorl1
Sortilin-related receptor.
    
 0.970
Ighg1
Immunoglobulin heavy constant gamma 1 (G1m marker).
   
  0.967
Cntn5
Contactin-5.
   
 
 0.966
ENSMUGP00000032199
Contactin-5-like.
   
 
 0.966
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
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