STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AlyrefTHO complex subunit 4. (256 aa)    
Predicted Functional Partners:
Nxf1
Nuclear RNA export factor 1.
    
 0.999
Ddx39b
ATP-dependent RNA helicase UAP56/SUB2.
   
 0.996
Eif4a3
Eukaryotic initiation factor 4A-III.
   
 0.996
ENSMUGP00000029403
THO complex subunit 2-like.
   
 0.995
Thoc3
THO complex subunit 3.
   
 0.993
Thoc5
THO complex subunit 5 homolog isoform X1.
   
 0.993
Thoc2l
THO complex subunit 2.
   
 0.992
Thoc1
THO complex subunit 1.
    
 0.991
Sap18
Histone deacetylase complex subunit SAP18.
   
 
 0.974
Upf3b
Regulator of nonsense transcripts 3B isoform X1.
    
 0.972
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.