STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LipkLipase member K-like. (324 aa)    
Predicted Functional Partners:
Iah1
Isoamyl acetate-hydrolyzing esterase 1 homolog isoform X1.
      
 0.547
ENSMUGP00000004662
annotation not available
  
 0.525
Palb2
Partner and localizer of BRCA2 isoform X1.
  
 0.525
Ndufab1
NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein.
  
 0.525
ENSMUGP00000032621
annotation not available
     
 0.487
Apob
Apolipoprotein B-100.
     
 0.474
Scd4
Stearoyl-coenzyme A desaturase 4.
      
 0.432
Coq3
Ubiquinone biosynthesis O-methyltransferase, mitochondrial.
   
 
 0.420
Fasn
Fatty acid synthase, animal type.
  
 
 0.416
Pcf11
PCF11 cleavage and polyadenylation factor subunit.
      
 0.402
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
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