STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbpl1Transcription initiation factor TFIID TATA-box-binding protein. (186 aa)    
Predicted Functional Partners:
Gtf2b
Transcription initiation factor TFIIB.
   
 0.991
Nfya
Nuclear transcription factor Y subunit alpha isoform X1.
    
 0.922
Tbp
Transcription initiation factor TFIID TATA-box-binding protein.
  
 
0.918
Tbpl2
Transcription initiation factor TFIID TATA-box-binding protein.
  
 
0.918
Sp1
Transcription factor Sp1.
    
 0.913
Gtf2a1l
Transcription initiation factor TFIIA large subunit.
   
 0.910
Gtf2a1
Transcription initiation factor TFIIA large subunit.
   
 0.907
Rbpj
Recombining binding protein suppressor of hairless isoform X1.
    
  0.905
Rbpjl
Recombining binding protein suppressor of hairless-like protein.
    
  0.905
Myod1
Myoblast determination protein 1.
    
 0.904
Your Current Organism:
Meriones unguiculatus
NCBI taxonomy Id: 10047
Other names: M. unguiculatus, Mongolian gerbil, Mongolian jird
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.